高效合成葡萄糖二酸酿酒酵母工程菌的构建

葡萄糖二酸是天然存在的一种重要二元酸,其在医疗保健和化工工业等领域具有很高的实际应用价值,因此被称为“最具价值的生物炼制产品之一”。以酿酒酵母(Saccharomyces cerevisiae)为底盘微生物,文中考察了过量表达肌醇转运蛋白Itr1、融合表达肌醇加氧酶和葡萄糖醛酸脱氢酶以及弱化表达葡萄糖6-磷酸脱氢酶基因ZWF1三种策略对葡萄糖二酸产量的影响。研究结果显示,过量表达肌醇转运蛋白Itr1使葡萄糖二酸产量在摇瓶发酵条件下较出发菌株Bga-3提高了26%;MIOX4-Udh融合蛋白的表达使葡萄糖二酸的产量较Bga-3菌株提高了40%;在此基础上,弱化表达葡萄糖6-磷酸脱氢酶基因ZWF1后,葡萄糖二酸的产量达5.5 g/L,较相同发酵条件下Bga-3菌株提高了60%。在5 L发酵罐中,该菌株葡萄糖二酸的最高产量达10.85 g/L,较Bga-3菌株提高了80%。由此可见,上述代谢改造策略的应用在很大程度上提高了葡萄糖二酸的途径效率和产量,为通过代谢工程方法在酿酒酵母中合成其他化合物的研究提供了参考。     

ABCG transporters export cutin precursors for the formation of the plant cuticle

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Fhit Deficiency-Induced Global Genome Instability Promotes Mutation and Clonal Expansion

Loss of Fhit expression, encoded at chromosome fragile site FRA3B, leads to increased replication stress, genome instability and accumulation of genetic alterations. We have proposed that Fhit is a genome ‘caretaker’ whose loss initiates genome instability in preneoplastic lesions. We have characterized allele copy number alterations and expression changes observed in Fhit-deficient cells in conjunction with alterations in cellular proliferation and exome mutations, using cells from mouse embryo fibroblasts (MEFs), mouse kidney, early and late after establishment in culture, and in response to carcinogen treatment. Fhit ^-/- MEFs escape senescence to become immortal more rapidly than Fhit ^+/+ MEFs; -/- MEFs and kidney cultures show allele losses and gains, while +/+ derived cells show few genomic alterations. Striking alterations in expression of p53, p21, Mcl1 and active caspase 3 occurred in mouse kidney -/- cells during progressive tissue culture passage. To define genomic changes associated with preneoplastic changes in vivo, exome DNAs were sequenced for +/+ and -/- liver tissue after treatment of mice with the carcinogen, 7,12-dimethylbenz[a]anthracene, and for +/+ and -/- kidney cells treated in vitro with this carcinogen. The -/- exome DNAs, in comparison with +/+ DNA, showed small insertions, deletions and point mutations in more genes, some likely related to preneoplastic changes. Thus, Fhit loss provides a ‘mutator’ phenotype, a cellular environment in which mild genome instability permits clonal expansion, through proliferative advantage and escape from apoptosis, in response to pressures to survive.     

Cotton AnnGh3 Encoding an Annexin Protein is Preferentially Expressed in Fibers and Promotes Initiation and Elongation of Leaf Trichomes in Transgenic Arabidopsis

The annexins are a multifamily of calcium-regulated phospholipid-binding proteins. To investigate the roles of annexins in fiber development, four genes encoding putative annexin proteins were isolated...     

模拟根系分泌物输入对高寒退化草地土壤微生物残体的影响

微生物残体是稳定土壤碳库的重要来源，对退化生境碳的固持和积累具有重要意义。植物根系分泌物作为植物-土壤-微生物"交流"的媒介，是调控土壤微生物残体迁移转化的关键。因此，以极度退化草地土壤为对象，以氨基糖为标志物，模拟研究了不同氮浓度（低氮-LN：0.1 gN/kg；高氮-HN：0.2 gN/kg）和多样性（3种化合物、9种化合物）根系分泌物输入对土壤微生物残体的影响。结果表明：（1）根系分泌物输入可显著增加高寒退化草地土壤微生物残体含量，且主要由真菌残体贡献。其中高氮和低多样性处理增加最明显，微生物残体和真菌残体分别增加了101.14%，125.16%，而低氮和高多样性处理微生物残体和真菌残体仅增加了35.79%，33.51%。（2）根系分泌物的输入可增加土壤β-葡萄糖苷酶、土壤磷酸酶和过氧化物酶活性，促进微生物的生长，而降低β-N-乙酰氨基葡萄糖苷酶活性，减少微生物残体的分解。（3）回归分析结果显示，土壤微生物残体与土壤环境的C/N呈显著负相关，与微生物生物量C/N呈显著正相关。上述结果表明，在未来退化草地恢复中，可充分利用模拟根系分泌物输入的土壤固碳策略，即通过提高土壤氮的有效性，促进微生物的生长，加快代谢周转，进一步提高微生物残体含量。     

Identification of SRY‐box 30 as an age‐related essential gatekeeper for male germ‐cell meiosis and differentiation

Although important factors governing the meiosis have been reported in the embryonic ovary, meiosis in postnatal testis remains poorly understood. Herein, we first report that SRY‐box 30 (Sox30) is an age‐related and essential regulator of meiosis in the postnatal testis. Sox30‐null mice exhibited uniquely impaired testis, presenting the abnormal arrest of germ‐cell differentiation and irregular Leydig cell proliferation. In aged Sox30‐null mice, the observed testicular impairments were more severe. Furthermore, the germ‐cell arrest occurred at the stage of meiotic zygotene spermatocytes, which is strongly associated with critical regulators of meiosis (such as Cyp26b1, Stra8 and Rec8) and sex differentiation (such as Rspo1, Foxl2, Sox9, Wnt4 and Ctnnb1). Mechanistically, Sox30 can activate Stra8 and Rec8, and inhibit Cyp26b1 and Ctnnb1 by direct binding to their promoters. A different Sox30 domain required for regulating the activity of these gene promoters, providing a “fail‐safe” mechanism for Sox30 to facilitate germ‐cell differentiation. Indeed, retinoic acid levels were reduced owing to increased degradation following the elevation of Cyp26b1 in Sox30‐null testes. Re‐expression of Sox30 in Sox30‐null mice successfully restored germ‐cell meiosis, differentiation and Leydig cell proliferation. Moreover, the restoration of actual fertility appeared to improve over time. Consistently, Rec8 and Stra8 were reactivated, and Cyp26b1 and Ctnnb1 were reinhibited in the restored testes. In summary, Sox30 is necessary, sufficient and age‐associated for germ‐cell meiosis and differentiation in testes by direct regulating critical regulators. This study advances our understanding of the regulation of germ‐cell meiosis and differentiation in the postnatal testis.     

羊膜及羊膜匀浆液在眼科学中应用的研究进展

羊膜应用于医学已有一个多世纪,应用于眼科也有70余年的历史。因种种原因,在很长一段时间里,对羊膜的研究停滞不前,但随着生物医学技术和其它相关技术的发展,羊膜的解剖结构及生物学特性研究得越来越深入。而随着羊膜的解剖和生物学特性日益明确,羊膜在医学和组织工程学中的应用也越来越广泛,并且应用前景广阔。近年来,由于羊膜的诸多解剖和生物学特性符合眼科学发展的需要,羊膜在眼科中的应用也日益广泛,并取得了良好的临床效果。羊膜的研磨提取液-羊膜匀浆液保留了羊膜中的有效生物成分,在治疗眼部疾病方面也取得了一定的进展。国内外关于羊膜及羊膜匀浆的研究文献有很多,为了更深入了解羊膜的特性及其在眼科疾病治疗方面的优势,该文将对羊膜的应用历史、羊膜及羊膜匀浆液的制备及保存、生物学特性及其在眼科学中的应用作一综述。     

A Novel Method for Fast Change-Point Detection on Simulated Time Series and Electrocardiogram Data

Although Kolmogorov-Smirnov (KS) statistic is a widely used method, some weaknesses exist in investigating abrupt Change Point (CP) problems, e.g. it is time-consuming and invalid sometimes. To detect abrupt change from time series fast, a novel method is proposed based on Haar Wavelet (HW) and KS statistic (HWKS). First, the two Binary Search Trees (BSTs), termed TcA and TcD, are constructed by multi-level HW from a diagnosed time series; the framework of HWKS method is implemented by introducing a modified KS statistic and two search rules based on the two BSTs; and then fast CP detection is implemented by two HWKS-based algorithms. Second, the performance of HWKS is evaluated by simulated time series dataset. The simulations show that HWKS is faster, more sensitive and efficient than KS, HW, and T methods. Last, HWKS is applied to analyze the electrocardiogram (ECG) time series, the experiment results show that the proposed method can find abrupt change from ECG segment with maximal data fluctuation more quickly and efficiently, and it is very helpful to inspect and diagnose the different state of health from a patient''s ECG signal.